Commit 4f9df47d authored by Christoffer Flensburg's avatar Christoffer Flensburg

Update README.md

parent 614ae91c
......@@ -9,14 +9,7 @@ Download the repo, for exampel through
git clone https://gitlab.wehi.edu.au/flensburg.c/superfreq_rna_paper
```
open R and
```
source('compareMethods.R')
```
You need superFreq and vioplot R-packages installed. It is tested on R v3.6.0.
SuperFreq can be installed from [https://github.com/ChristofferFlensburg/superFreq](https://github.com/ChristofferFlensburg/superFreq).
You need superFreq and vioplot R-packages installed.
SuperFreq can be installed with
```
......@@ -36,5 +29,13 @@ vioplot can be installed with
install.packages("vioplot")
```
open R (it's been tested on R v3.6.0) and
```
source('compareMethods.R')
```
# Expected output
The script takes about 5 minutes to run, and should produce the plots and supplementary plots in a new directory. It should match the already present expectedPlots directory.
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